SUMMARY:

Comprehensive experience in software development and support primarily within the life science and healthcare industries, with a strong background in successfully delivering complex scientific software solutions. Possess diverse set of technical competencies with proven achievements in applied knowledge and execution. Seeking opportunity with growth oriented institution to utilize broad education, skill set and expertise.

CORE COMPETENCIES:

Languages: Java, C/C++, Confidential, Python, R, Javascript, jQuery, VB, XSLT

Data formats: XML, JSON

Databases: Oracle, PostgreSQL, Neo4J, Cassandra, Hadoop

Frameworks: Spring, Hibernate, JSP

O/S: CentOS, Ubuntu server, Solaris, Windows

Software: Eclipse, Tomcat, Git, Puppet, Toad, ER Studio, RStudio, SRS, Sharepoint, MS office

Domain Knowledge: Bioinformatics, Laboratory Informatics, Confidential, Knowledge Management, Data Mining, Genomics, Genotyping, NGS, Health Information, CRM

PROFESSIONAL EXPERIENCE:

Confidential, Dallas, TX

Software Engineering Team Lead

Responsibilities:

• Responsible for delivery and support of software solutions to clients in Healthcare sector.
• Designed data model and implemented batch processing for analytics in PostgreSQL.
• Built Java modules and maintained Confidential scripts. Identified and delivered new components and bug fixes using Java and Spring framework.
• Applied TDD, agile and continuous integration to software delivery and maintenance.
• Delivered and maintained rules - based proprietary software to support health insurance client
• Successfully specified and implemented a CRM solution using Lambda architecture based on Hadoop, Spark, Thrift, Cassandra, Neo4j, Apache Kafka and Storm for healthcare startup.

Confidential, Columbia, MD

Senior Applications Specialist

Responsibilities:

• Cultivated and built working relationships with range of customers including clinicians and research scientists.
• Worked with clients to develop database queries and ETL scripts.
• Designed and implemented data structures in Oracle and PostgreSQL.
• Developed user interfaces using Java/JQuery and proprietary software.
• Designed and developed workflows in Confidential and Python.
• Implemented ETL solution that reduced overnight data mart update times by order of magnitude.
• Customization of proprietary software as a service (SaaS) for HIPAA compliant clinical data storage.

Confidential, Dallas, TX

Computational Biologist

Responsibilities:

• Applied Confidential sequencing software on local Penguin Confidential clusters and at Confidential .
• Specification, setup and maintenance of Penguin Confidential clusters.
• Customized proprietary software for implementation on Confidential clusters.
• Designed and employed ad hoc tools in Confidential and Python for analysis and display of complex data sets.
• Developed workflow for genotyping including custom script development in Python.
• Genotyping workflow and custom SNP identification and analysis software suite.

Confidential, Plano, TX

Project Lead and Business Analyst

Responsibilities:

• Implemented social networking tools for capture of tacit knowledge.
• Meticulously documented and communicated requirements to remote development team for implementation.
• Coordinated input from R&D and other stakeholders.
• Successfully delivered KM system providing central R&D document repository and social networking tools including a Wiki
• Acted as business analyst for project to deliver Electronic Laboratory Notebook and LIMS systems.

Confidential, Waltham, MA

Discovery Informatics Team Lead

Responsibilities:

• Designed, developed and maintained Discovery Informatics Software.
• Led development of a suite of software for handling targets-related information, including systems specific to a molecular class or research area and implementation of software for analysis and exploitation.
• Discovery IS lead for implementation of a Global targets system combining various data sources throughout the company including toxicology data, bio-materials information, expression data etc., used for data analysis, visualization and decision support.
• Implemented graph-based data model in Oracle and Neo4j.
• Devised and employed a clinical project portfolio system for Infection.
• Implemented system for monitoring animal test outcomes using various statistical methods.
• Produced departmental policies and procedures and served as representative on Global Human Tissue Repository project
• Successful implemented suite of software that combined disparate data sources in order to provide decision support for R&D project teams
• Project lead on the development of a bacterial strain and biomaterial management system by implementing a customized version of a vendor based solution. Project involved working with offshore resource based in Karachi.

Confidential

Senior Informatics Developer

Responsibilities:

• Developed tools and databases for the Confidential and Research directorates.
• Designed drug target database using Java applications/applets around an EJB-based architecture.
• Developed Java/Oracle applications for microbial genomic data and clinical data for Respiratory Diseases Group.
• Used SRS to interface to Oracle for analysis and presentation of data. IT Lead for development of Confidential System.
• Led design and implementation in Java/Oracle.Developed Oracle database with Confidential interface for analysis of Differential Gene Expression raw data.
• Interfaced to R-based system.
• Team Lead of Chemical Structure Systems Group.
• Responsible for compound registration and sample handling.
• Delivered Confidential Management System.
• Software was responsible for provided a single entry point to access information from the Human Genome Initiative including gene expression data, EST and STS data, candidate gene information and bio repository sample data.